2006 Yamaha FJR1300A Problems
- Complaints
- 47filed with NHTSA
- Median mileage
- 22,000miles, 46 complaints with mileage
- Recalls
- 0campaigns on record
- Trend
- StableComplaints filed in the last 3 full calendar years are within 25% of the 3 years before.
Sources: NHTSA records for the 2006 Yamaha FJR1300A (complaints, recalls, investigations). Report an error
NHTSA recorded 47 consumer complaints for the 2006 Yamaha FJR1300A. The part named most often is electrical system, with 39 complaints (83% of the total), followed by exterior lighting (4) and engine cooling (3). 46 of the complaints include a mileage, and 83% of those were filed for vehicles with under 50,000 miles; the median is 22,000 miles. Of all complaints, 1 involved a crash, 1 an injury, according to the filers. NHTSA lists 0 recall campaigns and 4 technical service bulletins for this model year. Electrical system complaints overlap with 2 NHTSA investigations filed under the same part.
Not compared (before 2008). Model years 2008–2023 of the same vehicle that have at least 25 complaints are compared, and a model needs at least 3 of them.
Which parts are reported most
Complaints can name more than one part, so the counts add up to more than the total. Select a part to see its complaints, recalls and bulletins.
- Electrical system39 83%
- Exterior lighting4 8.5%
- Engine cooling3 6.4%
- Fuel system2 4.3%
- Tires1 2.1%
Example complaints
Electrical system: “2006 Yamaha fjr 1300 a. Wire connection near fuel tank corroded and was melting. Headlamps quit, along with horn, turn signals. Engine would miss with the turn signal switch in the left or right position. I was in the dark, when the lights quit. I have heard of other fjr 1300 owners with the same problem.”
NHTSA complaint #10291767, filed 2009-11, 29,457 milesExterior lighting: “Bike lost headlights (again). I've had electrical fixes under recall and this continues. Had ignition replaced, ground fault work done, entire wiring harness replaced and now it has left me stranded again without lights. This is a dangerous situation to lose your headlights. Its a known recurrent problem with this bike. High beam indicator stays on, strange flashing turn signal indicators remain on, no windshield motor control, no headlights, no high or low beam. Yamaha needs to come up with proper fix for this dangerous situation. …”
NHTSA complaint #10897141, filed 2016-08, 58,000 milesEngine cooling: “While gaining speed up on ramp to the freeway all power shut down on the bike. I pulled to the side and cycled the ignition switch. I then wiggled wires below the switch and was able to start the bike. It died three more times before I reached home. Each time moving the wires would allow power to return.”
NHTSA complaint #10239473, filed 2008-08, 21,992 milesFuel system: “Purchased a new 2006 Yamaha fjr1300 motorcycle. The throttle action is extremely quick and stiff, so much so that applying throttle in turns can cause over acceleration and possible loss of control. It is also a problem in traffic and starting out, but turns present the largest danger. Yamaha states in their ads that they improved the throttle action in 2006 but they have made it very dangerous for anyone and particularly a new rider who may not be as smooth. I have owned 12 motorcycles and have been riding for 30 years. I feel this is a gross oversight on Yamaha's part.”
NHTSA complaint #10164544, filed 2006-08, 1 milesMileage when problems were reported
83% of the 46 complaints with a mileage were filed for vehicles with under 50,000 miles; the middle half falls between 14,500 and 37,500 miles.
Complaints by year filed
Trend: stable. Complaints filed in the last 3 full calendar years are within 25% of the 3 years before.
Recalls and investigations
NHTSA lists no recall campaigns for the 2006 Yamaha FJR1300A in the data used here. A recall can apply to some vehicles of a model year and not others, so check a specific vehicle by VIN at nhtsa.gov/recalls.
NHTSA investigations
- EA08025Motorcycle stalling - electricalClosed · Nov 21, 2008
- PE08048Motorcycle stalling - electricalClosed · Aug 8, 2008
Technical service bulletins
TSBs are manufacturer notes to dealers about known repair procedures. They are not recalls and do not by themselves mean a vehicle has a fault. 4 on record; the latest 4 are shown.
- 10055289Feb 7, 2014Equipment. Yamaha mc: when looking for technical information, a comprehensive index is provided regarding technical solutions for various problems.
- 10023797Oct 17, 2007Engine cooling. Yamaha motorcycle - 2006-2007 fjr1300a/ae -- poor engine performance occurs when changing to a higher or lower altitude while cruising at a relatively steady speed (more noticeable when altitude…
- 10020341Sep 1, 2006Transmission and drivetrain. Electronic gear shift actuator/new owner's manual. Yamaha. 2006 fjr13aev, aevc.
- 10020172Jun 23, 2006Fuel system, Other or unknown. Incorrect display of instantaneous fuel consumption.
Other model years of the Yamaha FJR1300A
| Year | Complaints | Median mi | Recalls | Crash ★ | MPG | Score (50 = typical) | Trend |
|---|---|---|---|---|---|---|---|
| 2006 | 47 | 22,000 | 0 | — | — | Not compared (before 2008) | Stable |
All Yamaha FJR1300A model years
Frequently asked questions
How many NHTSA complaints does the 2006 Yamaha FJR1300A have?
NHTSA recorded 47 consumer complaints for the 2006 Yamaha FJR1300A as of Oct 28, 2026. Complaints are unverified consumer reports and may be duplicated or inaccurate.
What part of the 2006 Yamaha FJR1300A is reported most often?
Electrical system is named most often, in 39 complaints (83% of the total), followed by exterior lighting with 4.
Has the 2006 Yamaha FJR1300A been recalled?
NHTSA lists no recall campaigns for this model year in the data used here. To check a specific vehicle, enter its VIN at nhtsa.gov/recalls.
At what mileage are problems with the 2006 Yamaha FJR1300A reported?
Among the 46 complaints that include a mileage, the median is 22,000 miles and the middle half falls between 14,500 and 37,500 miles; 83% were filed for vehicles with under 50,000 miles.
About this data. Data from NHTSA (ODI) complaints, recalls, TSBs and investigations, updated Oct 28, 2026. Complaints are unverified consumer reports and may be duplicated or inaccurate.
Complaint counts come from NHTSA’s public complaint database; we count each complaint once. The source records for this vehicle are on nhtsa.gov. Scores and trends are our own summaries of that data, described in the methodology. This page is not legal, safety or repair advice: for a specific vehicle, check its VIN at nhtsa.gov/recalls and ask a qualified mechanic. See an error? Tell us.